CDS
| Accession Number | TCMCG066C29657 |
| gbkey | CDS |
| Protein Id | XP_034606161.1 |
| Location | join(35187027..35187536,35188315..35188797,35189282..35189794,35189891..35189971) |
| Gene | LOC117865985 |
| GeneID | 117865985 |
| Organism | Setaria viridis |
Protein
| Length | 528aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034750270.1 |
| Definition | SAM50-like protein SPAC17C9.06 [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | M |
| Description | Surface antigen |
| KEGG_TC | 1.B.33 |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko02000 [VIEW IN KEGG] ko03029 [VIEW IN KEGG] |
| KEGG_ko |
ko:K07277
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0006996
[VIEW IN EMBL-EBI] GO:0007005 [VIEW IN EMBL-EBI] GO:0007006 [VIEW IN EMBL-EBI] GO:0007007 [VIEW IN EMBL-EBI] GO:0008150 [VIEW IN EMBL-EBI] GO:0009987 [VIEW IN EMBL-EBI] GO:0016043 [VIEW IN EMBL-EBI] GO:0042407 [VIEW IN EMBL-EBI] GO:0061024 [VIEW IN EMBL-EBI] GO:0071840 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCAACCGCATCCGACAGCACCCATCCTCCTCCTCCTTCCACCCCCCACGACGACGACGACGATGAAGAATTCGACGGCGACGACCTCGACGACGAAGCCGACGAGTACGACGACGACGACGACGACGACGACGACGATGACGGCGAATCCTCGGCATCCCCATCCGAGGAGGCGCGCCTCGAGGCCGTGCTCCGGCGGCTCACCGCGGATGAGGTCCGGATCCGGGTGCACCAGGTCGCGATCCGGGGCTGCGCCCGCACGCGCCGCGCCGCGGTCGAGGCCGCGGTGGGCACGGACCTCGCGCGCGCCGCCACCGTGCGAGACCTCGTGCGCGCTGCCGCGGCGGCCGGCGACCGCCTCCGTCTCCTCGGCGCCTTCGATACCGTCTCCATCACGCTCGACGCGCCTCCGCCAGGGACTCCCGGCAGCGCCGTTGTCGTACTCGTTGACGTCTCAGAGGCCCGCGGACGCGCTGCCACTGAATTCGGCGTCTTCGCTAACACTCAGACTAGATCATGTTCACTGGAAGGTTCACTGAAGTTGAAGAACCTATTTGGATACTGCGAGACCTGGGATGCAGCAGGTGCCCTTGAATTAGATCAGACAGCAGAACTAAGTGCTGGAGTGGAAATGCCTAGAATCGGAGCAATACCAACTCCACTGGTGGCTAGAATATCATTTCTGTCCGAAGACTGGTTAAAGTCCTCACTTAAAGAACACCTAATGGGTGTTTCTGTTGGCTTGCTCTCCACCATGAACCACAACCTTGCCTACAATTTGACATGGCGAAAATTAACCGATCCAGCACGCATGTCATCCAATTCTGTACAAGAGCAGTTAGCACATAGCCTTTTGTCCTCTGTTAAGTATGCCTACACGGTTGACCAAAGGGACTCAAGCATAAGGCCTACACGTGGATATGCTTTTCTGTCGTCTTCTCAAGTAGGAGGTCTTGCACCAGGGAGCAAATATTCACAGTTTCTTAGACAGGAATTTGATCTTCGAGTGGCTTTGCCTCTGGGTGTGCTGAATGGTGCTCTCAATGCCGGAGTTGCTGCAGGAGTCATCCATCCATTGGAAAGGGGATCCACAGGATCTGTCTCACCACTTTCAGAAAGGTTTTACTTGGGGGGTAACAGGTCTCTTGTATGCCGCTTGGGTGGACCATCGTCACTCTTAGGCTTCAAAACAAGAGGACTTGGGGCTACAGAACTCAGAACCTGTGACCCCAATAATTCTGAAAACGGTACTTCCACTTCTCCTGAGCTAAATGGTCTTGGAGGTGACATAGCAGTGACAGCCTTTGCGGACCTGTCCTTTGATATTCCTCTGAAGCCGCTCAGGGATCTTGGAATTCATGGCCATGCATTTGTCTGTGCTGGAAATCTTGGTAAATTAACTGAGTGTGATCTGCGGAAATTTCCCCTTACCAACTTCCTACAGACATTCAGGAGTTCTGCGGGATTTGGTGTAGTCGTGCCAACGAGATTGTTTCGCATAGAGGTAAACTACTGCCACATCCTGAGACAGTTTGACCATGACAAGGGAAAGACAGGCATACAGTTTAACTTCGCTTCACCCTAA |
| Protein: MATASDSTHPPPPSTPHDDDDDEEFDGDDLDDEADEYDDDDDDDDDDDGESSASPSEEARLEAVLRRLTADEVRIRVHQVAIRGCARTRRAAVEAAVGTDLARAATVRDLVRAAAAAGDRLRLLGAFDTVSITLDAPPPGTPGSAVVVLVDVSEARGRAATEFGVFANTQTRSCSLEGSLKLKNLFGYCETWDAAGALELDQTAELSAGVEMPRIGAIPTPLVARISFLSEDWLKSSLKEHLMGVSVGLLSTMNHNLAYNLTWRKLTDPARMSSNSVQEQLAHSLLSSVKYAYTVDQRDSSIRPTRGYAFLSSSQVGGLAPGSKYSQFLRQEFDLRVALPLGVLNGALNAGVAAGVIHPLERGSTGSVSPLSERFYLGGNRSLVCRLGGPSSLLGFKTRGLGATELRTCDPNNSENGTSTSPELNGLGGDIAVTAFADLSFDIPLKPLRDLGIHGHAFVCAGNLGKLTECDLRKFPLTNFLQTFRSSAGFGVVVPTRLFRIEVNYCHILRQFDHDKGKTGIQFNFASP |